Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ldb2O55203 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.92■□□□□ 0.46
Ldb2O55203 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.92■□□□□ 0.46
Ldb2O55203 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb2O55203 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
Ldb2O55203 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.91■□□□□ 0.46
Ldb2O55203 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ldb2O55203 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.91■□□□□ 0.46
Ldb2O55203 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.91■□□□□ 0.46
Ldb2O55203 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 Rarb-207ENSMUST00000225921 2756 ntBASIC17.91■□□□□ 0.46
Ldb2O55203 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb2O55203 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ldb2O55203 Flg-201ENSMUST00000050758 1488 ntBASIC17.9■□□□□ 0.46
Ldb2O55203 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Ldb2O55203 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.9■□□□□ 0.46
Ldb2O55203 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ldb2O55203 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ldb2O55203 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb2O55203 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.9■□□□□ 0.46
Ldb2O55203 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ldb2O55203 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ldb2O55203 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb2O55203 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb2O55203 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb2O55203 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ldb2O55203 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb2O55203 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb2O55203 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb2O55203 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb2O55203 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.89■□□□□ 0.45
Ldb2O55203 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ldb2O55203 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.88■□□□□ 0.45
Ldb2O55203 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ldb2O55203 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ldb2O55203 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb2O55203 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ldb2O55203 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb2O55203 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb2O55203 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.87■□□□□ 0.45
Ldb2O55203 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb2O55203 Gm11927-201ENSMUST00000118472 759 ntBASIC17.87■□□□□ 0.45
Ldb2O55203 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.87■□□□□ 0.45
Ldb2O55203 Gm2559-201ENSMUST00000201323 363 ntBASIC17.87■□□□□ 0.45
Ldb2O55203 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.87■□□□□ 0.45
Ldb2O55203 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb2O55203 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb2O55203 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb2O55203 Dio3-201ENSMUST00000097228 1449 ntBASIC17.87■□□□□ 0.45
Ldb2O55203 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb2O55203 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb2O55203 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ldb2O55203 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb2O55203 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.86■□□□□ 0.45
Ldb2O55203 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.86■□□□□ 0.45
Ldb2O55203 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.86■□□□□ 0.45
Ldb2O55203 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb2O55203 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb2O55203 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb2O55203 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb2O55203 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb2O55203 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.86■□□□□ 0.45
Ldb2O55203 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb2O55203 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.86■□□□□ 0.45
Ldb2O55203 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb2O55203 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms