Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl13O55038 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cxcl13O55038 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.25■□□□□ 0.03
Cxcl13O55038 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.24■□□□□ 0.03
Cxcl13O55038 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cxcl13O55038 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Cxcl13O55038 Gm15565-201ENSMUST00000118890 427 ntBASIC15.24■□□□□ 0.03
Cxcl13O55038 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.24■□□□□ 0.03
Cxcl13O55038 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.24■□□□□ 0.03
Cxcl13O55038 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cxcl13O55038 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cxcl13O55038 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cxcl13O55038 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.23■□□□□ 0.03
Cxcl13O55038 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.23■□□□□ 0.03
Cxcl13O55038 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.23■□□□□ 0.03
Cxcl13O55038 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.23■□□□□ 0.03
Cxcl13O55038 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.23■□□□□ 0.03
Cxcl13O55038 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cxcl13O55038 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Cxcl13O55038 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Cxcl13O55038 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl13O55038 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl13O55038 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl13O55038 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl13O55038 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cxcl13O55038 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Cxcl13O55038 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cxcl13O55038 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl13O55038 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.22■□□□□ 0.03
Cxcl13O55038 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl13O55038 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cxcl13O55038 Gm5417-201ENSMUST00000079706 384 ntBASIC15.22■□□□□ 0.03
Cxcl13O55038 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cxcl13O55038 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl13O55038 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.22■□□□□ 0.03
Cxcl13O55038 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cxcl13O55038 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cxcl13O55038 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl13O55038 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl13O55038 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cxcl13O55038 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl13O55038 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.21■□□□□ 0.03
Cxcl13O55038 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl13O55038 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.21■□□□□ 0.03
Cxcl13O55038 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cxcl13O55038 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.21■□□□□ 0.03
Cxcl13O55038 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cxcl13O55038 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl13O55038 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl13O55038 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl13O55038 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl13O55038 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl13O55038 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl13O55038 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl13O55038 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cxcl13O55038 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
Cxcl13O55038 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.2■□□□□ 0.02
Cxcl13O55038 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.2■□□□□ 0.02
Cxcl13O55038 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Cxcl13O55038 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cxcl13O55038 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Cxcl13O55038 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cxcl13O55038 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.2■□□□□ 0.02
Cxcl13O55038 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cxcl13O55038 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cxcl13O55038 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cxcl13O55038 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms