Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.24□□□□□ -0.13
Efnb3O35393 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Efnb3O35393 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Efnb3O35393 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Efnb3O35393 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Efnb3O35393 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Efnb3O35393 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Efnb3O35393 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Efnb3O35393 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.23□□□□□ -0.13
Efnb3O35393 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.23□□□□□ -0.13
Efnb3O35393 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.23□□□□□ -0.13
Efnb3O35393 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Efnb3O35393 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Efnb3O35393 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Efnb3O35393 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Efnb3O35393 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Efnb3O35393 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Efnb3O35393 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Efnb3O35393 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Efnb3O35393 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Efnb3O35393 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.21□□□□□ -0.13
Efnb3O35393 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.21□□□□□ -0.13
Efnb3O35393 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Efnb3O35393 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Efnb3O35393 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.21□□□□□ -0.13
Efnb3O35393 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Efnb3O35393 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Efnb3O35393 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Efnb3O35393 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Efnb3O35393 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Efnb3O35393 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Efnb3O35393 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Efnb3O35393 Gm43017-201ENSMUST00000198296 752 ntBASIC14.2□□□□□ -0.14
Efnb3O35393 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.2□□□□□ -0.14
Efnb3O35393 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Efnb3O35393 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Efnb3O35393 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.2□□□□□ -0.14
Efnb3O35393 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms