Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx4O35137 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Alx4O35137 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Alx4O35137 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Alx4O35137 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.06■□□□□ 0.16
Alx4O35137 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.06■□□□□ 0.16
Alx4O35137 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Alx4O35137 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx4O35137 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Alx4O35137 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Alx4O35137 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Alx4O35137 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Alx4O35137 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Alx4O35137 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.05■□□□□ 0.16
Alx4O35137 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Alx4O35137 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.04■□□□□ 0.16
Alx4O35137 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Alx4O35137 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Alx4O35137 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Alx4O35137 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.04■□□□□ 0.16
Alx4O35137 Gm43017-201ENSMUST00000198296 752 ntBASIC16.04■□□□□ 0.16
Alx4O35137 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Alx4O35137 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.04■□□□□ 0.16
Alx4O35137 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Alx4O35137 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Alx4O35137 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Alx4O35137 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.03■□□□□ 0.16
Alx4O35137 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Alx4O35137 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.03■□□□□ 0.16
Alx4O35137 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Alx4O35137 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Alx4O35137 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.02■□□□□ 0.16
Alx4O35137 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.02■□□□□ 0.16
Alx4O35137 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
Alx4O35137 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Alx4O35137 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Alx4O35137 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Alx4O35137 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Alx4O35137 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Alx4O35137 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.02■□□□□ 0.15
Alx4O35137 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Alx4O35137 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Alx4O35137 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.02■□□□□ 0.15
Alx4O35137 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.02■□□□□ 0.15
Alx4O35137 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms