Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.66■□□□□ 0.58
Ebf3O08791 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.66■□□□□ 0.58
Ebf3O08791 Mir5122-201ENSMUST00000175004 89 ntBASIC18.66■□□□□ 0.58
Ebf3O08791 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ebf3O08791 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ebf3O08791 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.65■□□□□ 0.58
Ebf3O08791 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.65■□□□□ 0.58
Ebf3O08791 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.65■□□□□ 0.58
Ebf3O08791 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.65■□□□□ 0.58
Ebf3O08791 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.65■□□□□ 0.58
Ebf3O08791 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ebf3O08791 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf3O08791 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ebf3O08791 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ebf3O08791 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.64■□□□□ 0.57
Ebf3O08791 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.64■□□□□ 0.57
Ebf3O08791 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf3O08791 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ebf3O08791 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ebf3O08791 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.63■□□□□ 0.57
Ebf3O08791 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Ebf3O08791 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf3O08791 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 Gm9987-201ENSMUST00000069768 567 ntBASIC18.62■□□□□ 0.57
Ebf3O08791 Gm5417-201ENSMUST00000079706 384 ntBASIC18.62■□□□□ 0.57
Ebf3O08791 Zfp783-201ENSMUST00000095946 670 ntBASIC18.62■□□□□ 0.57
Ebf3O08791 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf3O08791 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.62■□□□□ 0.57
Ebf3O08791 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ebf3O08791 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.61■□□□□ 0.57
Ebf3O08791 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Ebf3O08791 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.61■□□□□ 0.57
Ebf3O08791 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Ebf3O08791 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf3O08791 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf3O08791 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf3O08791 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.6■□□□□ 0.57
Ebf3O08791 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf3O08791 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms