Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Tcof1O08784 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tcof1O08784 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tcof1O08784 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tcof1O08784 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tcof1O08784 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tcof1O08784 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tcof1O08784 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.09■□□□□ 0.97
Tcof1O08784 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.09■□□□□ 0.97
Tcof1O08784 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.09■□□□□ 0.97
Tcof1O08784 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcof1O08784 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.08■□□□□ 0.97
Tcof1O08784 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.08■□□□□ 0.97
Tcof1O08784 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.08■□□□□ 0.97
Tcof1O08784 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tcof1O08784 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tcof1O08784 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tcof1O08784 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tcof1O08784 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tcof1O08784 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Tcof1O08784 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tcof1O08784 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
Tcof1O08784 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Tcof1O08784 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcof1O08784 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcof1O08784 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.07■□□□□ 0.96
Tcof1O08784 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Tcof1O08784 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.07■□□□□ 0.96
Tcof1O08784 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tcof1O08784 Rarb-207ENSMUST00000225921 2756 ntBASIC21.07■□□□□ 0.96
Tcof1O08784 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcof1O08784 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcof1O08784 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcof1O08784 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tcof1O08784 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Tcof1O08784 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tcof1O08784 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.06■□□□□ 0.96
Tcof1O08784 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Tcof1O08784 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.06■□□□□ 0.96
Tcof1O08784 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tcof1O08784 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tcof1O08784 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.06■□□□□ 0.96
Tcof1O08784 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tcof1O08784 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tcof1O08784 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Tcof1O08784 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tcof1O08784 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tcof1O08784 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcof1O08784 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcof1O08784 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tcof1O08784 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcof1O08784 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcof1O08784 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcof1O08784 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcof1O08784 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Tcof1O08784 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.05■□□□□ 0.96
Tcof1O08784 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcof1O08784 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.05■□□□□ 0.96
Tcof1O08784 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.04■□□□□ 0.96
Tcof1O08784 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tcof1O08784 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tcof1O08784 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Tcof1O08784 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Tcof1O08784 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tcof1O08784 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.04■□□□□ 0.96
Tcof1O08784 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tcof1O08784 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tcof1O08784 Gm10138-203ENSMUST00000206952 366 ntBASIC21.04■□□□□ 0.96
Tcof1O08784 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.03■□□□□ 0.96
Tcof1O08784 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.03■□□□□ 0.96
Tcof1O08784 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcof1O08784 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tcof1O08784 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tcof1O08784 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Tcof1O08784 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tcof1O08784 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tcof1O08784 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tcof1O08784 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tcof1O08784 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tcof1O08784 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.02■□□□□ 0.95
Tcof1O08784 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Tcof1O08784 Gm15375-201ENSMUST00000119510 849 ntBASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms