Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Gm7514-201ENSMUST00000209475 934 ntBASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.51■□□□□ 0.23
Hist1h2aeC0HKE4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h2aeC0HKE4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Gm6420-201ENSMUST00000193885 723 ntBASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h2aeC0HKE4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Nespas-201ENSMUST00000143738 1083 ntBASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.48■□□□□ 0.23
Hist1h2aeC0HKE4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h2aeC0HKE4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h2aeC0HKE4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h2aeC0HKE4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms