Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv17A0A140T8P8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv17A0A140T8P8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv17A0A140T8P8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv17A0A140T8P8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trbv17A0A140T8P8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms