Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-43A0A0A6YXN5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm11643-201ENSMUST00000119578 864 ntBASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.58■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ighv1-43A0A0A6YXN5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Gm21814-202ENSMUST00000203277 873 ntBASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Tgds-204ENSMUST00000228543 1594 ntBASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Gm5417-201ENSMUST00000079706 384 ntBASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-43A0A0A6YXN5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms