Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbc1A0A0A6YWV4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbc1A0A0A6YWV4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Gm20049-201ENSMUST00000219950 730 ntBASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trbc1A0A0A6YWV4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbc1A0A0A6YWV4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbc1A0A0A6YWV4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbc1A0A0A6YWV4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbc1A0A0A6YWV4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbc1A0A0A6YWV4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms