Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm21956-201ENSMUST00000179946 522 ntBASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm38205-201ENSMUST00000192243 258 ntBASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm13241-201ENSMUST00000094493 780 ntBASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gm43173-201ENSMUST00000202246 593 ntBASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13-4-dv7A0A075B6C2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13-4-dv7A0A075B6C2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms