Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12d-3A0A075B6A4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12d-3A0A075B6A4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav12d-3A0A075B6A4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav12d-3A0A075B6A4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav12d-3A0A075B6A4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav12d-3A0A075B6A4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms