Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Gm40881-201ENSMUST00000223397 166 ntBASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4d-3A0A075B625 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav4d-3A0A075B625 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4d-3A0A075B625 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4d-3A0A075B625 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4d-3A0A075B625 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav4d-3A0A075B625 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav4d-3A0A075B625 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4d-3A0A075B625 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4d-3A0A075B625 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4d-3A0A075B625 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav4d-3A0A075B625 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav4d-3A0A075B625 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms