Protein–RNA interactions for Protein: A0A075B5V5

Ighv1-39, Immunoglobulin heavy variable 1-39 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-39A0A075B5V5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-39A0A075B5V5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-39A0A075B5V5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm7291-201ENSMUST00000199147 382 ntBASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm8969-201ENSMUST00000199694 526 ntBASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-39A0A075B5V5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Tgds-204ENSMUST00000228543 1594 ntBASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-39A0A075B5V5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ighv1-39A0A075B5V5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
Ighv1-39A0A075B5V5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ighv1-39A0A075B5V5 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.14□□□□□ -0.15
Ighv1-39A0A075B5V5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms