Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 AC105407.2-205ENSMUST00000224680 2733 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm37022-201ENSMUST00000192517 2254 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm13488-201ENSMUST00000120419 179 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm4290-201ENSMUST00000206897 814 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 AC159002.2-201ENSMUST00000228843 4874 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm7363-201ENSMUST00000119883 399 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm23259-201ENSMUST00000158318 303 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Gm37790-201ENSMUST00000193136 3346 ntBASIC5.24□□□□□ -1.57
Rif1Q6PR54 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Rif1Q6PR54 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm13930-201ENSMUST00000118569 368 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm13224-201ENSMUST00000119586 94 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm25178-201ENSMUST00000122633 325 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Mir1932-201ENSMUST00000157390 90 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm25748-201ENSMUST00000175487 70 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Mir7658-201ENSMUST00000184043 57 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm35648-201ENSMUST00000202304 475 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm26376-201ENSMUST00000104784 110 ntBASIC5.23□□□□□ -1.57
Rif1Q6PR54 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.23□□□□□ -1.57
Rif1Q6PR54 Gm22952-201ENSMUST00000116720 120 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms