Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm13493-201ENSMUST00000120318 493 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm8317-201ENSMUST00000121261 471 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm20480-201ENSMUST00000173953 250 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm26738-201ENSMUST00000181312 601 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm29385-201ENSMUST00000186831 363 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm28080-201ENSMUST00000188552 722 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm21524-201ENSMUST00000190499 696 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm21715-201ENSMUST00000191056 694 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm37191-201ENSMUST00000193346 388 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm24041-201ENSMUST00000083115 156 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Cldn3Q9Z0G9 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm14580-201ENSMUST00000119122 718 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm13998-201ENSMUST00000120952 335 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm12140-201ENSMUST00000121214 544 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm6081-201ENSMUST00000134472 489 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm19739-201ENSMUST00000195941 153 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm2602-201ENSMUST00000202112 571 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm10688-201ENSMUST00000214985 520 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm8290-201ENSMUST00000218202 477 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Cldn3Q9Z0G9 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms