Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Lima1Q9ERG0 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm13679-201ENSMUST00000118678 484 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm26162-201ENSMUST00000157793 132 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm44370-201ENSMUST00000175436 112 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm8367-201ENSMUST00000186145 887 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm28195-201ENSMUST00000186992 372 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm37758-201ENSMUST00000194275 629 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm22300-201ENSMUST00000082661 126 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm23686-201ENSMUST00000083241 164 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.89□□□□□ -1.47
Lima1Q9ERG0 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm26289-201ENSMUST00000104169 131 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm25346-201ENSMUST00000104509 128 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm11370-201ENSMUST00000120583 260 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm15164-201ENSMUST00000122203 271 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm5430-201ENSMUST00000182525 915 ntBASIC5.88□□□□□ -1.47
Lima1Q9ERG0 Gm29111-201ENSMUST00000188823 696 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms