Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NcanP55066 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NcanP55066 Gm14796-201ENSMUST00000121216 959 ntBASIC6.59□□□□□ -1.35
NcanP55066 Gm24628-201ENSMUST00000122761 289 ntBASIC6.59□□□□□ -1.35
NcanP55066 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.59□□□□□ -1.35
NcanP55066 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Gm23031-201ENSMUST00000157998 119 ntBASIC6.59□□□□□ -1.35
NcanP55066 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.59□□□□□ -1.35
NcanP55066 Gm18444-201ENSMUST00000191239 629 ntBASIC6.59□□□□□ -1.35
NcanP55066 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.59□□□□□ -1.35
NcanP55066 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.59□□□□□ -1.35
NcanP55066 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.59□□□□□ -1.35
NcanP55066 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.59□□□□□ -1.35
NcanP55066 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NcanP55066 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NcanP55066 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.59□□□□□ -1.35
NcanP55066 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.59□□□□□ -1.36
NcanP55066 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
NcanP55066 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.59□□□□□ -1.36
NcanP55066 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
NcanP55066 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.58□□□□□ -1.36
NcanP55066 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NcanP55066 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NcanP55066 Mir708-201ENSMUST00000102189 109 ntBASIC6.58□□□□□ -1.36
NcanP55066 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Gm12494-201ENSMUST00000121684 521 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm14970-201ENSMUST00000122289 355 ntBASIC6.58□□□□□ -1.36
NcanP55066 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.58□□□□□ -1.36
NcanP55066 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.58□□□□□ -1.36
NcanP55066 Gm25057-201ENSMUST00000157366 88 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC6.58□□□□□ -1.36
NcanP55066 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm28975-201ENSMUST00000186412 686 ntBASIC6.58□□□□□ -1.36
NcanP55066 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.58□□□□□ -1.36
NcanP55066 Gm38291-201ENSMUST00000193671 259 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm43160-201ENSMUST00000196453 421 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm44259-201ENSMUST00000204996 298 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm3189-201ENSMUST00000205595 832 ntBASIC6.58□□□□□ -1.36
NcanP55066 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm45249-201ENSMUST00000211021 348 ntBASIC6.58□□□□□ -1.36
NcanP55066 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.58□□□□□ -1.36
NcanP55066 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm24041-201ENSMUST00000083115 156 ntBASIC6.58□□□□□ -1.36
NcanP55066 Mir31-201ENSMUST00000083474 106 ntBASIC6.58□□□□□ -1.36
NcanP55066 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.58□□□□□ -1.36
NcanP55066 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NcanP55066 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Grik1-210ENSMUST00000228034 2708 ntBASIC6.58□□□□□ -1.36
NcanP55066 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NcanP55066 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
NcanP55066 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms