Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox1P53783 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.2□□□□□ -1.26
Sox1P53783 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox1P53783 Gm44972-201ENSMUST00000206419 406 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.2□□□□□ -1.26
Sox1P53783 Gm18600-201ENSMUST00000207205 505 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Gm4574-201ENSMUST00000207804 542 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox1P53783 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC7.2□□□□□ -1.26
Sox1P53783 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.2□□□□□ -1.26
Sox1P53783 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.2□□□□□ -1.26
Sox1P53783 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.2□□□□□ -1.26
Sox1P53783 AC154417.1-201ENSMUST00000223876 476 ntBASIC7.2□□□□□ -1.26
Sox1P53783 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.2□□□□□ -1.26
Sox1P53783 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox1P53783 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox1P53783 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Sox1P53783 Mir27a-201ENSMUST00000083510 87 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Gm7676-201ENSMUST00000084055 319 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Gm10205-201ENSMUST00000087431 234 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox1P53783 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox1P53783 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Sox1P53783 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox1P53783 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 AC130219.1-201ENSMUST00000228406 3433 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Sox1P53783 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Sox1P53783 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Sox1P53783 Retreg1-203ENSMUST00000226438 2783 ntBASIC7.2□□□□□ -1.26
Sox1P53783 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC7.19□□□□□ -1.26
Sox1P53783 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Gm43319-201ENSMUST00000198036 2270 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm22371-201ENSMUST00000104588 130 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm15311-201ENSMUST00000119682 282 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm12044-201ENSMUST00000120335 213 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm15305-201ENSMUST00000120354 288 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm14601-201ENSMUST00000120892 236 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm13940-201ENSMUST00000121023 301 ntBASIC7.19□□□□□ -1.26
Sox1P53783 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC7.19□□□□□ -1.26
Sox1P53783 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm3140-201ENSMUST00000163523 481 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox1P53783 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm20396-201ENSMUST00000173358 745 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.19□□□□□ -1.26
Sox1P53783 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Dlx6os1-204ENSMUST00000184182 146 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm29413-201ENSMUST00000186019 880 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Gm43493-201ENSMUST00000199837 202 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm42646-201ENSMUST00000202233 914 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm18205-201ENSMUST00000209215 841 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox1P53783 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC7.19□□□□□ -1.26
Sox1P53783 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm3266-201ENSMUST00000217832 591 ntBASIC7.19□□□□□ -1.26
Sox1P53783 AC156950.1-201ENSMUST00000219604 456 ntBASIC7.19□□□□□ -1.26
Sox1P53783 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.19□□□□□ -1.26
Sox1P53783 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 CT010480.5-201ENSMUST00000225026 217 ntBASIC7.19□□□□□ -1.26
Sox1P53783 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox1P53783 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox1P53783 Olfr192-201ENSMUST00000080251 925 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Sox1P53783 Gm22977-201ENSMUST00000082615 107 ntBASIC7.19□□□□□ -1.26
Sox1P53783 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Sox1P53783 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms