Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxc9P09633 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Hoxc9P09633 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxc9P09633 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm9930-201ENSMUST00000066742 3151 ntBASIC7.81□□□□□ -1.16
Hoxc9P09633 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.81□□□□□ -1.16
Hoxc9P09633 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm5381-201ENSMUST00000117975 1250 ntBASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm12293-201ENSMUST00000121898 590 ntBASIC7.81□□□□□ -1.16
Hoxc9P09633 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm28066-201ENSMUST00000188657 472 ntBASIC7.81□□□□□ -1.16
Hoxc9P09633 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC7.81□□□□□ -1.16
Hoxc9P09633 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm6776-201ENSMUST00000057752 900 ntBASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Hoxc9P09633 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.81□□□□□ -1.16
Hoxc9P09633 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxc9P09633 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC7.8□□□□□ -1.16
Hoxc9P09633 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Hoxc9P09633 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.8□□□□□ -1.16
Hoxc9P09633 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC7.8□□□□□ -1.16
Hoxc9P09633 AC165260.6-204ENSMUST00000225571 3508 ntBASIC7.8□□□□□ -1.16
Hoxc9P09633 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.8□□□□□ -1.16
Hoxc9P09633 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Hoxc9P09633 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Gm38291-201ENSMUST00000193671 259 ntBASIC7.8□□□□□ -1.16
Hoxc9P09633 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC7.8□□□□□ -1.16
Hoxc9P09633 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC7.8□□□□□ -1.16
Hoxc9P09633 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
Hoxc9P09633 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Hoxc9P09633 Gm25682-201ENSMUST00000083942 164 ntBASIC7.8□□□□□ -1.16
Hoxc9P09633 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Hoxc9P09633 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Hoxc9P09633 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Hoxc9P09633 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hoxc9P09633 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.8□□□□□ -1.16
Hoxc9P09633 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxc9P09633 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxc9P09633 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxc9P09633 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxc9P09633 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxc9P09633 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Hoxc9P09633 AC110043.1-201ENSMUST00000220278 1627 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm22194-201ENSMUST00000116869 95 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm12488-201ENSMUST00000122449 499 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm24216-201ENSMUST00000158259 117 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm24767-201ENSMUST00000158509 95 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm17142-201ENSMUST00000164933 645 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Mir3110-201ENSMUST00000175053 80 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Gm37358-201ENSMUST00000195492 479 ntBASIC7.79□□□□□ -1.16
Hoxc9P09633 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Hoxc9P09633 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms