Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm18405-201ENSMUST00000220743 511 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm7557-201ENSMUST00000221935 865 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.34□□□□□ -1.55
Nkx3-1P97436 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Nkx3-1P97436 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.34□□□□□ -1.56
Nkx3-1P97436 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
Nkx3-1P97436 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm14755-201ENSMUST00000118037 384 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm14331-201ENSMUST00000120396 409 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm23408-201ENSMUST00000158523 265 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm16139-201ENSMUST00000160015 420 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm22690-201ENSMUST00000175054 110 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm22932-201ENSMUST00000175510 72 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm37375-201ENSMUST00000193859 387 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm37385-201ENSMUST00000195223 387 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm43798-201ENSMUST00000202056 394 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Thap6-201ENSMUST00000191860 3151 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.33□□□□□ -1.56
Nkx3-1P97436 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.33□□□□□ -1.56
Nkx3-1P97436 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.32□□□□□ -1.56
Nkx3-1P97436 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.32□□□□□ -1.56
Nkx3-1P97436 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms