Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Magea8-201ENSMUST00000070141 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Lekr1-201ENSMUST00000099075 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Pla2g6-210ENSMUST00000174021 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm37956-201ENSMUST00000195208 2010 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm25088-201ENSMUST00000101803 79 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm12075-201ENSMUST00000117426 397 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm13586-201ENSMUST00000121784 464 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm13904-201ENSMUST00000121901 837 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm24236-201ENSMUST00000157794 134 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Ciao1-205ENSMUST00000174863 531 ntTSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm25736-201ENSMUST00000175165 101 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm24304-201ENSMUST00000177635 107 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm5698-201ENSMUST00000178317 724 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm5272-201ENSMUST00000182730 982 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm9320-201ENSMUST00000184151 473 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Ly6c1-205ENSMUST00000187347 522 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm29485-201ENSMUST00000190220 282 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm2404-201ENSMUST00000196197 844 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm44657-201ENSMUST00000208568 450 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC9.06□□□□□ -0.96
Trim35Q8C006 AC124408.2-201ENSMUST00000228168 645 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm24446-201ENSMUST00000083982 156 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Pcdh15-210ENSMUST00000125517 3074 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm3126-201ENSMUST00000216513 1468 ntBASIC9.06□□□□□ -0.96
Trim35Q8C006 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Wdr20rt-203ENSMUST00000221980 1667 ntTSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Akr1cl-201ENSMUST00000069142 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Apex2-204ENSMUST00000112721 1852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gsdmc3-202ENSMUST00000185526 2179 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trim35Q8C006 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Pex5l-201ENSMUST00000078226 3164 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trim35Q8C006 Gm15773-201ENSMUST00000118665 1448 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Xpo7-206ENSMUST00000228346 4491 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Sncaip-210ENSMUST00000179689 1512 ntTSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 AC154729.1-201ENSMUST00000224481 1501 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm10568-201ENSMUST00000193244 1634 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Nme7-207ENSMUST00000193683 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm15930-201ENSMUST00000156603 2037 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 AC122197.1-201ENSMUST00000220281 2142 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 A530076I17Rik-201ENSMUST00000138379 2408 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm45714-201ENSMUST00000211466 2722 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Zfp677-201ENSMUST00000056107 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Ncald-201ENSMUST00000090150 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gpcpd1-201ENSMUST00000028822 3179 ntTSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm42895-201ENSMUST00000200761 2996 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Lrit3-202ENSMUST00000185462 2456 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm37764-201ENSMUST00000194664 2150 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Slc36a1os-202ENSMUST00000157010 1790 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm15826-201ENSMUST00000121328 1384 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm14839-201ENSMUST00000117983 714 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm11199-201ENSMUST00000118691 507 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm4234-201ENSMUST00000119747 714 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm12721-201ENSMUST00000120621 268 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm12338-201ENSMUST00000122170 192 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm8813-201ENSMUST00000155930 595 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Slc15a2-205ENSMUST00000164579 1068 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm17223-201ENSMUST00000171413 481 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm8984-201ENSMUST00000183005 1019 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm27350-201ENSMUST00000185109 98 ntBASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms