Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm12939-201ENSMUST00000117303 165 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm12375-201ENSMUST00000119331 921 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm24682-201ENSMUST00000158764 137 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm22642-201ENSMUST00000175352 252 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm37135-201ENSMUST00000192652 534 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Hoxc5P32043 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.56□□□□□ -1.52
Hoxc5P32043 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Hoxc5P32043 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxc5P32043 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm24069-201ENSMUST00000104512 127 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm13811-201ENSMUST00000117800 256 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm14331-201ENSMUST00000120396 409 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 Mir7058-201ENSMUST00000184637 75 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm37774-201ENSMUST00000194401 245 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm37871-201ENSMUST00000194973 688 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm3544-201ENSMUST00000196129 305 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxc5P32043 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.55□□□□□ -1.52
Hoxc5P32043 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxc5P32043 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hoxc5P32043 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Hoxc5P32043 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 Gm22952-201ENSMUST00000116720 120 ntBASIC5.54□□□□□ -1.52
Hoxc5P32043 Gm9836-201ENSMUST00000117132 216 ntBASIC5.54□□□□□ -1.52
Hoxc5P32043 Gm9506-201ENSMUST00000118516 320 ntBASIC5.54□□□□□ -1.52
Hoxc5P32043 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.54□□□□□ -1.52
Hoxc5P32043 Gm4234-201ENSMUST00000119747 714 ntBASIC5.54□□□□□ -1.52
Hoxc5P32043 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hoxc5P32043 Gm14349-201ENSMUST00000137155 902 ntBASIC5.54□□□□□ -1.52
Hoxc5P32043 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms