Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Mir219c-201ENSMUST00000199860 60 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm7663-201ENSMUST00000201151 1240 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Col6a6Q8C6K9 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm33601-201ENSMUST00000210001 961 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm37274-201ENSMUST00000192167 1682 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm24789-201ENSMUST00000104282 131 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm22959-201ENSMUST00000122514 303 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm24236-201ENSMUST00000157794 134 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm23031-201ENSMUST00000157998 119 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm26172-201ENSMUST00000158421 134 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm3307-201ENSMUST00000176164 632 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm8524-201ENSMUST00000186232 379 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm24525-201ENSMUST00000082917 151 ntBASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a6Q8C6K9 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm44436-201ENSMUST00000204200 1494 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm12040-201ENSMUST00000118357 537 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm13579-201ENSMUST00000118519 517 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm25826-201ENSMUST00000157090 137 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm23149-201ENSMUST00000158837 230 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm1972-201ENSMUST00000181606 964 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm27543-201ENSMUST00000183562 177 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm27985-201ENSMUST00000185112 378 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm18117-201ENSMUST00000187720 742 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm18444-201ENSMUST00000191239 629 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Gm28392-201ENSMUST00000077630 393 ntBASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a6Q8C6K9 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms