Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 CU062626.1-201ENSMUST00000225248 505 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm25189-201ENSMUST00000083911 164 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 CT025675.1-201ENSMUST00000228171 1567 ntBASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim47Q8C0E3 Pramel-201ENSMUST00000118979 1383 ntBASIC8.09□□□□□ -1.12
Trim47Q8C0E3 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Trim47Q8C0E3 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
Trim47Q8C0E3 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Trim47Q8C0E3 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.09□□□□□ -1.12
Trim47Q8C0E3 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm15175-201ENSMUST00000117629 132 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm12944-201ENSMUST00000119262 463 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm12321-201ENSMUST00000121485 804 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm24442-201ENSMUST00000157238 327 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm16297-201ENSMUST00000161466 459 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm7244-201ENSMUST00000164658 455 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm7346-201ENSMUST00000169661 476 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm27160-201ENSMUST00000184837 199 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm37295-201ENSMUST00000192186 109 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm8101-201ENSMUST00000192796 478 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm42804-201ENSMUST00000199701 178 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm43493-201ENSMUST00000199837 202 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm44773-201ENSMUST00000207374 557 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm8275-201ENSMUST00000219732 424 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Ap3m1-208ENSMUST00000224016 764 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 AC154506.3-201ENSMUST00000225417 213 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 AC154838.1-201ENSMUST00000228944 911 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim47Q8C0E3 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm16436-201ENSMUST00000121510 1607 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Gm17101-201ENSMUST00000169520 1588 ntBASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim47Q8C0E3 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms