Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col2a1P28481 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col2a1P28481 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
Col2a1P28481 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col2a1P28481 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col2a1P28481 Gm15233-201ENSMUST00000118747 400 ntBASIC6.91□□□□□ -1.3
Col2a1P28481 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.91□□□□□ -1.3
Col2a1P28481 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.91□□□□□ -1.3
Col2a1P28481 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.91□□□□□ -1.3
Col2a1P28481 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.91□□□□□ -1.3
Col2a1P28481 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.91□□□□□ -1.3
Col2a1P28481 Gm6056-201ENSMUST00000221253 488 ntBASIC6.91□□□□□ -1.3
Col2a1P28481 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col2a1P28481 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Col2a1P28481 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Col2a1P28481 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Col2a1P28481 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Col2a1P28481 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col2a1P28481 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.9□□□□□ -1.3
Col2a1P28481 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.9□□□□□ -1.3
Col2a1P28481 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col2a1P28481 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.9□□□□□ -1.3
Col2a1P28481 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col2a1P28481 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.9□□□□□ -1.3
Col2a1P28481 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col2a1P28481 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col2a1P28481 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Col2a1P28481 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Col2a1P28481 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Col2a1P28481 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Col2a1P28481 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Col2a1P28481 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col2a1P28481 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.9□□□□□ -1.31
Col2a1P28481 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col2a1P28481 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col2a1P28481 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Gm12094-201ENSMUST00000121781 472 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Gm15335-201ENSMUST00000122442 411 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.9□□□□□ -1.31
Col2a1P28481 Mir7685-201ENSMUST00000183555 62 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Gm29240-201ENSMUST00000187248 286 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Gm37341-201ENSMUST00000194680 371 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Gm45750-201ENSMUST00000211966 354 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Col2a1P28481 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.9□□□□□ -1.31
Col2a1P28481 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col2a1P28481 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col2a1P28481 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col2a1P28481 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
Col2a1P28481 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Col2a1P28481 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Col2a1P28481 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Col2a1P28481 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col2a1P28481 Gm25826-201ENSMUST00000157090 137 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Gm24731-201ENSMUST00000158227 131 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Gm8582-201ENSMUST00000164061 789 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Gm44243-201ENSMUST00000204323 692 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 Gm44795-201ENSMUST00000205496 319 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Gm5418-201ENSMUST00000206932 528 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Gm4548-201ENSMUST00000208487 509 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Gm17988-201ENSMUST00000208796 535 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Col2a1P28481 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.89□□□□□ -1.31
Col2a1P28481 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Col2a1P28481 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Col2a1P28481 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.89□□□□□ -1.31
Col2a1P28481 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Col2a1P28481 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
Col2a1P28481 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Col2a1P28481 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Col2a1P28481 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.88□□□□□ -1.31
Col2a1P28481 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Col2a1P28481 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms