Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm15403-201ENSMUST00000119343 1227 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Gm14957-201ENSMUST00000121069 817 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm17075-201ENSMUST00000171924 670 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm37308-201ENSMUST00000194684 100 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Gm9023-201ENSMUST00000198408 1038 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm18587-201ENSMUST00000213736 841 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Gm20368-201ENSMUST00000220716 301 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Col18a1P39061 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Col18a1P39061 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Col18a1P39061 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 Gm43216-201ENSMUST00000196295 1333 ntBASIC8.27□□□□□ -1.09
Col18a1P39061 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col18a1P39061 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Col18a1P39061 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col18a1P39061 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm15480-201ENSMUST00000120442 519 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Gm16411-201ENSMUST00000122164 1100 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm8358-201ENSMUST00000167222 555 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC8.26□□□□□ -1.09
Col18a1P39061 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm8367-201ENSMUST00000186145 887 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Gm5334-201ENSMUST00000187472 720 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm43712-201ENSMUST00000198020 291 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Gm44213-201ENSMUST00000204977 703 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 AC164295.2-201ENSMUST00000228539 757 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 AC130217.2-201ENSMUST00000224009 2990 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
Col18a1P39061 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.26□□□□□ -1.09
Col18a1P39061 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col18a1P39061 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC8.25□□□□□ -1.09
Col18a1P39061 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Col18a1P39061 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Col18a1P39061 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm14510-201ENSMUST00000116165 1092 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm13678-201ENSMUST00000118926 340 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm11909-201ENSMUST00000121424 759 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm15187-201ENSMUST00000122329 264 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm25826-201ENSMUST00000157090 137 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm37973-201ENSMUST00000195767 1289 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm45032-201ENSMUST00000205375 520 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm45660-201ENSMUST00000210267 151 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm5457-201ENSMUST00000022260 333 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 CU062626.1-201ENSMUST00000225248 505 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 AC131178.1-201ENSMUST00000228649 492 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Clec2j-201ENSMUST00000032517 515 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC8.25□□□□□ -1.09
Col18a1P39061 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm8141-201ENSMUST00000190856 1723 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Col18a1P39061 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms