Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm44898-201ENSMUST00000205934 2223 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm15000-201ENSMUST00000118275 1243 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm28665-201ENSMUST00000189269 670 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm37758-201ENSMUST00000194275 629 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm3883-201ENSMUST00000098119 3229 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm16060-201ENSMUST00000153140 478 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm27985-201ENSMUST00000185112 378 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Gm5318-201ENSMUST00000205249 406 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a4A2AX52 AC129085.2-201ENSMUST00000223763 2800 ntBASIC5.17□□□□□ -1.58
Col6a4A2AX52 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 AC151984.1-201ENSMUST00000218261 2976 ntBASIC5.16□□□□□ -1.58
Col6a4A2AX52 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Mir3110-201ENSMUST00000175053 80 ntBASIC5.16□□□□□ -1.58
Col6a4A2AX52 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm29160-201ENSMUST00000190094 699 ntBASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm4587-201ENSMUST00000209135 637 ntBASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm45249-201ENSMUST00000211021 348 ntBASIC5.16□□□□□ -1.58
Col6a4A2AX52 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.16□□□□□ -1.58
Col6a4A2AX52 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a4A2AX52 AC138284.1-201ENSMUST00000214258 3236 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms