Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC154738.4-201ENSMUST00000228310 414 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 AC154355.1-201ENSMUST00000224604 2162 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Cldn1-201ENSMUST00000023154 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Nek10-203ENSMUST00000112631 3386 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 AC113125.1-201ENSMUST00000226852 1774 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm29427-201ENSMUST00000188520 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Dhx32-202ENSMUST00000063669 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Serpina1a-202ENSMUST00000085056 1360 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Zmynd11-202ENSMUST00000110633 1857 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Apex2-201ENSMUST00000026303 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm36949-201ENSMUST00000192487 2327 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gatb-204ENSMUST00000127348 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm8935-202ENSMUST00000105727 1959 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Slc7a13-201ENSMUST00000035890 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm14772-201ENSMUST00000116562 514 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm11833-201ENSMUST00000118393 853 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm16032-201ENSMUST00000118534 168 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm9005-201ENSMUST00000119908 607 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm13360-201ENSMUST00000121607 799 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm11635-202ENSMUST00000139424 472 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm22069-201ENSMUST00000179911 107 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Calm5-201ENSMUST00000183198 589 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm21013-201ENSMUST00000184952 1201 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Slc35a4-205ENSMUST00000185899 312 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm6227-201ENSMUST00000205237 421 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm2981-201ENSMUST00000213947 694 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm18623-201ENSMUST00000219860 953 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm6129-201ENSMUST00000220725 801 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 AC129019.1-201ENSMUST00000223463 410 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm9770-201ENSMUST00000075147 811 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm17541-201ENSMUST00000080062 525 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm22297-201ENSMUST00000083312 106 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm5499-201ENSMUST00000090731 885 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Olfr444-201ENSMUST00000095955 1050 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm10696-201ENSMUST00000161475 2247 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm10696-202ENSMUST00000167916 2205 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm14204-202ENSMUST00000123944 5380 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Zmynd8-204ENSMUST00000109262 2515 ntTSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 Taf9b-202ENSMUST00000113495 2512 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Trim35Q8C006 AC122397.1-201ENSMUST00000228650 2819 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gm44553-201ENSMUST00000206316 2037 ntBASIC9.1□□□□□ -0.95
Trim35Q8C006 Ppp2r2b-201ENSMUST00000025377 2031 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Atp6ap2-201ENSMUST00000033313 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Tango2-201ENSMUST00000115628 1507 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trim35Q8C006 Gle1-201ENSMUST00000019859 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Dgka-201ENSMUST00000026414 2834 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Zfp53-201ENSMUST00000076664 2058 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trim35Q8C006 Fas-201ENSMUST00000025691 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gdnf-201ENSMUST00000022744 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Amph-204ENSMUST00000200466 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Fam228a-204ENSMUST00000222363 2284 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Wfdc11-201ENSMUST00000109332 617 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trim35Q8C006 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms