Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Col17a1Q07563 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm13006-201ENSMUST00000118683 214 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm14908-201ENSMUST00000120930 1286 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm23327-201ENSMUST00000157420 78 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm27970-201ENSMUST00000184854 407 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm4854-201ENSMUST00000185902 574 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm43441-201ENSMUST00000201458 205 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm7128-201ENSMUST00000211639 533 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 AC079644.3-201ENSMUST00000222452 357 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm18247-201ENSMUST00000222937 601 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm45172-201ENSMUST00000206054 1301 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm7155-201ENSMUST00000121143 1671 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Grik1-210ENSMUST00000228034 2708 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 CT030159.1-201ENSMUST00000221580 2261 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 H3f3c-201ENSMUST00000119459 411 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm14776-201ENSMUST00000121029 887 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm12399-201ENSMUST00000121475 446 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm25292-201ENSMUST00000122797 322 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm22552-201ENSMUST00000157796 337 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col17a1Q07563 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm5288-201ENSMUST00000198323 1119 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm19169-201ENSMUST00000220109 1246 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 AC153153.2-201ENSMUST00000223572 411 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm24041-201ENSMUST00000083115 156 ntBASIC9.57□□□□□ -0.88
Col17a1Q07563 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.57□□□□□ -0.88
Col17a1Q07563 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col17a1Q07563 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col17a1Q07563 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col17a1Q07563 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Col17a1Q07563 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC9.56□□□□□ -0.88
Col17a1Q07563 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col17a1Q07563 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Col17a1Q07563 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Gm12328-201ENSMUST00000118611 197 ntBASIC9.56□□□□□ -0.88
Col17a1Q07563 Gm11805-201ENSMUST00000121238 600 ntBASIC9.56□□□□□ -0.88
Col17a1Q07563 Gm10319-202ENSMUST00000159439 846 ntBASIC9.56□□□□□ -0.88
Col17a1Q07563 Gm17511-201ENSMUST00000172206 342 ntBASIC9.56□□□□□ -0.88
Col17a1Q07563 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC9.56□□□□□ -0.88
Col17a1Q07563 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC9.56□□□□□ -0.88
Col17a1Q07563 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col17a1Q07563 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Col17a1Q07563 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col17a1Q07563 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm14000-201ENSMUST00000118670 233 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms