Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm15490-201ENSMUST00000119894 387 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm25227-201ENSMUST00000158204 112 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm17223-201ENSMUST00000171413 481 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC9.6□□□□□ -0.87
Col17a1Q07563 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm2287-202ENSMUST00000199619 1000 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm18215-201ENSMUST00000204429 798 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm2607-201ENSMUST00000212389 627 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm5119-201ENSMUST00000215858 634 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Col17a1Q07563 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm43537-201ENSMUST00000199064 3110 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC9.6□□□□□ -0.87
Col17a1Q07563 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm7961-201ENSMUST00000201338 1436 ntBASIC9.6□□□□□ -0.87
Col17a1Q07563 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Col17a1Q07563 Gm24578-201ENSMUST00000103970 129 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm16082-201ENSMUST00000115992 377 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm26098-201ENSMUST00000157247 288 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm36448-201ENSMUST00000199916 438 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm35648-201ENSMUST00000202304 475 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm5306-201ENSMUST00000203325 757 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm2225-201ENSMUST00000209570 377 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Ap3m1-208ENSMUST00000224016 764 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 AC160120.1-201ENSMUST00000227446 663 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm38118-201ENSMUST00000192052 2222 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm38284-201ENSMUST00000194803 4539 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm37101-201ENSMUST00000191656 3660 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm37429-201ENSMUST00000193807 1799 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm24117-201ENSMUST00000103973 133 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm23879-201ENSMUST00000116874 126 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm22923-201ENSMUST00000174952 110 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm37758-201ENSMUST00000194275 629 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm38840-201ENSMUST00000204716 843 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm45071-201ENSMUST00000205353 571 ntBASIC9.59□□□□□ -0.87
Col17a1Q07563 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col17a1Q07563 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col17a1Q07563 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Gm42898-201ENSMUST00000200370 3073 ntBASIC9.58□□□□□ -0.88
Col17a1Q07563 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Col17a1Q07563 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col17a1Q07563 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms