Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm12643-201ENSMUST00000116078 374 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm7927-201ENSMUST00000118818 880 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm14515-201ENSMUST00000121327 216 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm22569-201ENSMUST00000175545 124 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm21877-201ENSMUST00000185640 694 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm43048-201ENSMUST00000196101 388 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm18839-201ENSMUST00000204292 670 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm5318-201ENSMUST00000205249 406 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm7413-201ENSMUST00000219498 462 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Mir3068-201ENSMUST00000083004 136 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm24032-201ENSMUST00000083932 159 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cpne8Q9DC53 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm22714-201ENSMUST00000116894 78 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm13593-201ENSMUST00000121329 692 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm11962-201ENSMUST00000145746 255 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm18808-201ENSMUST00000173316 462 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm24081-201ENSMUST00000175177 125 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm37809-201ENSMUST00000195050 931 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm24041-201ENSMUST00000083115 156 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Cpne8Q9DC53 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.31□□□□□ -1.4
Cpne8Q9DC53 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Gm15765-201ENSMUST00000118407 910 ntBASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Gm9506-201ENSMUST00000118516 320 ntBASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Gm12375-201ENSMUST00000119331 921 ntBASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Gm4234-201ENSMUST00000119747 714 ntBASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Gm24812-201ENSMUST00000175315 284 ntBASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cpne8Q9DC53 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms