Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.8□□□□□ -1.48
P01852 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
P01852 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
P01852 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
P01852 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.8□□□□□ -1.48
P01852 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
P01852 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
P01852 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.8□□□□□ -1.48
P01852 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.8□□□□□ -1.48
P01852 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
P01852 Gm22103-201ENSMUST00000116733 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm26475-201ENSMUST00000116769 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm23620-201ENSMUST00000116812 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm25042-201ENSMUST00000116856 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm25540-201ENSMUST00000116880 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.8□□□□□ -1.48
P01852 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
P01852 Gm13455-201ENSMUST00000118767 517 ntBASIC5.8□□□□□ -1.48
P01852 Gm12565-201ENSMUST00000119004 649 ntBASIC5.8□□□□□ -1.48
P01852 Gm6461-201ENSMUST00000120015 633 ntBASIC5.8□□□□□ -1.48
P01852 Gm15181-201ENSMUST00000120142 177 ntBASIC5.8□□□□□ -1.48
P01852 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
P01852 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.8□□□□□ -1.48
P01852 Gm23229-201ENSMUST00000157297 105 ntBASIC5.8□□□□□ -1.48
P01852 Gm22223-201ENSMUST00000157360 125 ntBASIC5.8□□□□□ -1.48
P01852 Gm22428-201ENSMUST00000158554 132 ntBASIC5.8□□□□□ -1.48
P01852 Gm22094-201ENSMUST00000158976 117 ntBASIC5.8□□□□□ -1.48
P01852 Gm16102-201ENSMUST00000160955 420 ntBASIC5.8□□□□□ -1.48
P01852 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
P01852 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.8□□□□□ -1.48
P01852 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
P01852 Gm23550-201ENSMUST00000179003 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm25123-201ENSMUST00000179154 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm25353-201ENSMUST00000179366 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm22992-201ENSMUST00000179496 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm25892-201ENSMUST00000179867 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm24092-201ENSMUST00000180257 121 ntBASIC5.8□□□□□ -1.48
P01852 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.8□□□□□ -1.48
P01852 Gm27853-201ENSMUST00000184176 250 ntBASIC5.8□□□□□ -1.48
P01852 Gm8506-201ENSMUST00000186661 829 ntBASIC5.8□□□□□ -1.48
P01852 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.8□□□□□ -1.48
P01852 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.8□□□□□ -1.48
P01852 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.8□□□□□ -1.48
P01852 Gm2979-201ENSMUST00000193442 463 ntBASIC5.8□□□□□ -1.48
P01852 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.8□□□□□ -1.48
P01852 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.8□□□□□ -1.48
P01852 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.8□□□□□ -1.48
P01852 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.8□□□□□ -1.48
P01852 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.8□□□□□ -1.48
P01852 Gm45196-201ENSMUST00000206751 825 ntBASIC5.8□□□□□ -1.48
P01852 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.8□□□□□ -1.48
P01852 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.8□□□□□ -1.48
P01852 Gm18955-201ENSMUST00000223173 649 ntBASIC5.8□□□□□ -1.48
P01852 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.8□□□□□ -1.48
P01852 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
P01852 Gm24032-201ENSMUST00000083932 159 ntBASIC5.8□□□□□ -1.48
P01852 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
P01852 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
P01852 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
P01852 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.8□□□□□ -1.48
P01852 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.8□□□□□ -1.48
P01852 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.8□□□□□ -1.48
P01852 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
P01852 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.8□□□□□ -1.48
P01852 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
P01852 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
P01852 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
P01852 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.79□□□□□ -1.48
P01852 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
P01852 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P01852 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
P01852 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
P01852 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.79□□□□□ -1.48
P01852 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.79□□□□□ -1.48
P01852 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.79□□□□□ -1.48
P01852 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
P01852 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
P01852 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
P01852 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
P01852 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms