Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm18349-201ENSMUST00000187440 904 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Ighv5-19-201ENSMUST00000193466 297 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC4.97□□□□□ -1.61
Sdc1P18828 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm43467-201ENSMUST00000197441 437 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC4.97□□□□□ -1.61
Sdc1P18828 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 CT010431.1-201ENSMUST00000221249 1080 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 AC154487.1-201ENSMUST00000224649 226 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 AC138329.1-201ENSMUST00000225040 471 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sdc1P18828 Olfr192-201ENSMUST00000080251 925 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sdc1P18828 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Sdc1P18828 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Sdc1P18828 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Sdc1P18828 Gm9930-201ENSMUST00000066742 3151 ntBASIC4.96□□□□□ -1.61
Sdc1P18828 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sdc1P18828 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm38264-201ENSMUST00000194850 2032 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm42607-201ENSMUST00000200221 3393 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm22470-201ENSMUST00000104117 130 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm15310-201ENSMUST00000117891 372 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm15311-201ENSMUST00000119682 282 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm15305-201ENSMUST00000120354 288 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm11259-201ENSMUST00000120554 715 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm11258-201ENSMUST00000121086 1218 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Sdc1P18828 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm23756-201ENSMUST00000157582 114 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm23810-201ENSMUST00000175150 74 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm24307-201ENSMUST00000178512 101 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm5181-201ENSMUST00000183140 971 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm27468-201ENSMUST00000183577 106 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm27684-201ENSMUST00000183778 80 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Mir3473e-201ENSMUST00000183932 110 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm29369-201ENSMUST00000190674 615 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm37355-201ENSMUST00000193345 606 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm43383-201ENSMUST00000195981 469 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Sdc1P18828 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sdc1P18828 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sdc1P18828 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sdc1P18828 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sdc1P18828 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Sdc1P18828 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Sdc1P18828 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sdc1P18828 AC124516.1-201ENSMUST00000221845 3544 ntBASIC4.96□□□□□ -1.62
Sdc1P18828 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm45493-201ENSMUST00000209494 3948 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sdc1P18828 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Sdc1P18828 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 CT009480.3-201ENSMUST00000224051 3032 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm37132-201ENSMUST00000195553 2238 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms