Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.61■□□□□ 0.73
Nr1h3Q9Z0Y9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h3Q9Z0Y9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h3Q9Z0Y9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nr1h3Q9Z0Y9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h3Q9Z0Y9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.6■□□□□ 0.73
Nr1h3Q9Z0Y9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1h3Q9Z0Y9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm11643-201ENSMUST00000119578 864 ntBASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nr1h3Q9Z0Y9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1h3Q9Z0Y9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1h3Q9Z0Y9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1h3Q9Z0Y9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.58■□□□□ 0.73
Nr1h3Q9Z0Y9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1h3Q9Z0Y9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1h3Q9Z0Y9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Nr1h3Q9Z0Y9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1h3Q9Z0Y9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.57■□□□□ 0.72
Nr1h3Q9Z0Y9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm43183-201ENSMUST00000200632 547 ntBASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm5417-201ENSMUST00000079706 384 ntBASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nr1h3Q9Z0Y9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm15375-201ENSMUST00000119510 849 ntBASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Gm38285-201ENSMUST00000192928 922 ntBASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.55■□□□□ 0.72
Nr1h3Q9Z0Y9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms