Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.69■□□□□ 0.58
Snx1Q9WV80 Gm6139-201ENSMUST00000079261 882 ntBASIC18.69■□□□□ 0.58
Snx1Q9WV80 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx1Q9WV80 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx1Q9WV80 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Snx1Q9WV80 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx1Q9WV80 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snx1Q9WV80 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snx1Q9WV80 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.68■□□□□ 0.58
Snx1Q9WV80 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snx1Q9WV80 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Gm12821-201ENSMUST00000120022 600 ntBASIC18.67■□□□□ 0.58
Snx1Q9WV80 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.67■□□□□ 0.58
Snx1Q9WV80 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snx1Q9WV80 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.66■□□□□ 0.58
Snx1Q9WV80 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.66■□□□□ 0.58
Snx1Q9WV80 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snx1Q9WV80 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx1Q9WV80 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.65■□□□□ 0.58
Snx1Q9WV80 Gm43017-201ENSMUST00000198296 752 ntBASIC18.65■□□□□ 0.58
Snx1Q9WV80 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.65■□□□□ 0.58
Snx1Q9WV80 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Snx1Q9WV80 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snx1Q9WV80 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx1Q9WV80 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snx1Q9WV80 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx1Q9WV80 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx1Q9WV80 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx1Q9WV80 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Snx1Q9WV80 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.64■□□□□ 0.57
Snx1Q9WV80 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx1Q9WV80 Gm45417-201ENSMUST00000209533 758 ntBASIC18.64■□□□□ 0.57
Snx1Q9WV80 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx1Q9WV80 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx1Q9WV80 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snx1Q9WV80 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms