Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.3■□□□□ 0.52
RpgrQ9R0X5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Gm27405-201ENSMUST00000184201 112 ntBASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RpgrQ9R0X5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RpgrQ9R0X5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RpgrQ9R0X5 Fst-202ENSMUST00000223640 2612 ntBASIC18.27■□□□□ 0.51
RpgrQ9R0X5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RpgrQ9R0X5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RpgrQ9R0X5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RpgrQ9R0X5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RpgrQ9R0X5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms