Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.39■□□□□ 0.05
Rbfox1Q9JJ43 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Rbfox1Q9JJ43 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rbfox1Q9JJ43 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rbfox1Q9JJ43 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rbfox1Q9JJ43 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rbfox1Q9JJ43 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rbfox1Q9JJ43 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rbfox1Q9JJ43 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms