Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chmp2aQ9DB34 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2aQ9DB34 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2aQ9DB34 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2aQ9DB34 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chmp2aQ9DB34 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.83■□□□□ 0.61
Chmp2aQ9DB34 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Chmp2aQ9DB34 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Chmp2aQ9DB34 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.83■□□□□ 0.6
Chmp2aQ9DB34 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2aQ9DB34 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2aQ9DB34 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2aQ9DB34 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Chmp2aQ9DB34 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp2aQ9DB34 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Gm44549-201ENSMUST00000208351 577 ntBASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2aQ9DB34 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.81■□□□□ 0.6
Chmp2aQ9DB34 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Gm22325-201ENSMUST00000158904 308 ntBASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chmp2aQ9DB34 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Gm12896-201ENSMUST00000118430 226 ntBASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2aQ9DB34 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms