Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chaf1bQ9D0N7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chaf1bQ9D0N7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chaf1bQ9D0N7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chaf1bQ9D0N7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Mir7075-201ENSMUST00000184187 82 ntBASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chaf1bQ9D0N7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chaf1bQ9D0N7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chaf1bQ9D0N7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chaf1bQ9D0N7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Chaf1bQ9D0N7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chaf1bQ9D0N7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Chaf1bQ9D0N7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.96■□□□□ 0.3
Chaf1bQ9D0N7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1bQ9D0N7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms