Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Gm20614-201ENSMUST00000177106 632 ntBASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 AL672049.1-201ENSMUST00000197943 91 ntBASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC9.69□□□□□ -0.86
Sec61bQ9CQS8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Gm11643-201ENSMUST00000119578 864 ntBASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Zfp783-201ENSMUST00000095946 670 ntBASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC9.68□□□□□ -0.86
Sec61bQ9CQS8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Gm8309-201ENSMUST00000206627 1448 ntBASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 AC135963.1-201ENSMUST00000211640 717 ntBASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61bQ9CQS8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61bQ9CQS8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms