Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.27■□□□□ 0.52
Lsm7Q9CQQ8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsm7Q9CQQ8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Lsm7Q9CQQ8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm7Q9CQQ8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.25■□□□□ 0.51
Lsm7Q9CQQ8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Gm15375-201ENSMUST00000119510 849 ntBASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm7Q9CQQ8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm7Q9CQQ8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm7Q9CQQ8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lsm7Q9CQQ8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms