Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf111Q99ML9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf111Q99ML9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf111Q99ML9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf111Q99ML9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 AV356131-201ENSMUST00000206201 750 ntBASIC17.5■□□□□ 0.39
Rnf111Q99ML9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rnf111Q99ML9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Gm7514-201ENSMUST00000209475 934 ntBASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rnf111Q99ML9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.48■□□□□ 0.39
Rnf111Q99ML9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf111Q99ML9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf111Q99ML9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.46■□□□□ 0.39
Rnf111Q99ML9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms