Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap3Q99LM2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap3Q99LM2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap3Q99LM2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Cdk5rap3Q99LM2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Cdk5rap3Q99LM2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Cdk5rap3Q99LM2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap3Q99LM2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap3Q99LM2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Gm42778-201ENSMUST00000199644 553 ntBASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdk5rap3Q99LM2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap3Q99LM2 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms