Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfc4Q99J62 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc4Q99J62 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc4Q99J62 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc4Q99J62 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.83■□□□□ 0.93
Rfc4Q99J62 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc4Q99J62 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfc4Q99J62 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
Rfc4Q99J62 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.83■□□□□ 0.92
Rfc4Q99J62 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfc4Q99J62 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rfc4Q99J62 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc4Q99J62 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rfc4Q99J62 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc4Q99J62 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.82■□□□□ 0.92
Rfc4Q99J62 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc4Q99J62 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc4Q99J62 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfc4Q99J62 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.82■□□□□ 0.92
Rfc4Q99J62 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rfc4Q99J62 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.81■□□□□ 0.92
Rfc4Q99J62 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rfc4Q99J62 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfc4Q99J62 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rfc4Q99J62 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfc4Q99J62 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rfc4Q99J62 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rfc4Q99J62 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rfc4Q99J62 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rfc4Q99J62 Gm18959-201ENSMUST00000208954 655 ntBASIC20.79■□□□□ 0.92
Rfc4Q99J62 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfc4Q99J62 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfc4Q99J62 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rfc4Q99J62 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfc4Q99J62 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfc4Q99J62 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfc4Q99J62 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfc4Q99J62 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfc4Q99J62 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfc4Q99J62 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.78■□□□□ 0.92
Rfc4Q99J62 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfc4Q99J62 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.78■□□□□ 0.92
Rfc4Q99J62 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.78■□□□□ 0.92
Rfc4Q99J62 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfc4Q99J62 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.77■□□□□ 0.92
Rfc4Q99J62 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rfc4Q99J62 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfc4Q99J62 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfc4Q99J62 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfc4Q99J62 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfc4Q99J62 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.76■□□□□ 0.91
Rfc4Q99J62 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfc4Q99J62 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms