Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp1aQ921W0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Gm11421-201ENSMUST00000122124 294 ntBASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp1aQ921W0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp1aQ921W0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Gm12251-201ENSMUST00000117893 792 ntBASIC15.92■□□□□ 0.14
Chmp1aQ921W0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Gm27801-201ENSMUST00000184174 223 ntBASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chmp1aQ921W0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp1aQ921W0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms