Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Mir2861-201ENSMUST00000175539 82 ntBASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Gm10138-203ENSMUST00000206952 366 ntBASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha2Q91Y17 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.27■□□□□ 0.68
Pcdha2Q91Y17 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha2Q91Y17 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdha2Q91Y17 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha2Q91Y17 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdha2Q91Y17 Gm13168-201ENSMUST00000121771 632 ntBASIC19.27■□□□□ 0.68
Pcdha2Q91Y17 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha2Q91Y17 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.27■□□□□ 0.67
Pcdha2Q91Y17 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha2Q91Y17 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha2Q91Y17 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha2Q91Y17 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha2Q91Y17 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Gm18666-201ENSMUST00000190039 958 ntBASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha2Q91Y17 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha2Q91Y17 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Gm15375-201ENSMUST00000119510 849 ntBASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Gm8520-201ENSMUST00000186517 868 ntBASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha2Q91Y17 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Gm10698-201ENSMUST00000182663 604 ntBASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdha2Q91Y17 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Mir6349-201ENSMUST00000184059 97 ntBASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdha2Q91Y17 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms