Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm43183-201ENSMUST00000200632 547 ntBASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Gm9987-201ENSMUST00000069768 567 ntBASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb18Q91Y02 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb18Q91Y02 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb18Q91Y02 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb18Q91Y02 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb18Q91Y02 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.83■□□□□ 0.61
Pcdhb18Q91Y02 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Pcdhb18Q91Y02 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb18Q91Y02 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb18Q91Y02 Gm15375-201ENSMUST00000119510 849 ntBASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb18Q91Y02 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Gm38285-201ENSMUST00000192928 922 ntBASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Gm18025-201ENSMUST00000221733 862 ntBASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb18Q91Y02 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhb18Q91Y02 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms