Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb3Q91XZ7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb3Q91XZ7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhb3Q91XZ7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb3Q91XZ7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Gm11421-201ENSMUST00000122124 294 ntBASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Gm40848-201ENSMUST00000221998 324 ntBASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb3Q91XZ7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb3Q91XZ7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb3Q91XZ7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Dancr-204ENSMUST00000132389 2347 ntBASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdhb3Q91XZ7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhb3Q91XZ7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms