Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Flg-201ENSMUST00000050758 1488 ntBASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Zcchc9Q8R1J3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Zcchc9Q8R1J3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Zcchc9Q8R1J3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Zcchc9Q8R1J3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zcchc9Q8R1J3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc9Q8R1J3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc9Q8R1J3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc9Q8R1J3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zcchc9Q8R1J3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms